Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACE03622.1KEGG: amr:AM1_6172 transposase, IS5 family, putative. (498 aa)    
Predicted Functional Partners:
ACE03623.1
KEGG: atc:AGR_L_1417 hypothetical protein.
       0.773
gshB
PFAM: glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; KEGG: mgm:Mmc1_3083 glutathione synthase; Belongs to the prokaryotic GSH synthase family.
       0.773
ACE03660.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.567
ACE03123.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.553
ACE03721.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.553
ACE04093.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.553
ACE04447.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.553
ACE04840.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.553
ACE03339.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.535
ACE05092.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.535
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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