STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03634.1PFAM: integrase family protein; KEGG: bfs:BF1685 putative bacteriophage integrase; Belongs to the 'phage' integrase family. (390 aa)    
Predicted Functional Partners:
ACE03635.1
Hypothetical protein; KEGG: cyt:cce_2607 putative L-cysteine/cystine lyase.
       0.773
ACE03188.1
KEGG: pdi:BDI_2985 putative excisionase.
 
   
 0.718
ACE03638.1
TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: chu:CHU_1463 excisionase.
 
   
 0.492
ACE05145.1
KEGG: pvi:Cvib_0292 phosphoribosyltransferase.
   
    0.478
ACE03184.1
PFAM: integrase family protein; KEGG: spc:Sputcn32_4000 phage integrase family protein; Belongs to the 'phage' integrase family.
 
 
 
0.432
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.431
clpX
ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
     
 0.411
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.