STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03639.1PFAM: Cobyrinic acid ac-diamide synthase; KEGG: swi:Swit_5120 cobyrinic acid a,c-diamide synthase. (215 aa)    
Predicted Functional Partners:
ACE03642.1
KEGG: nar:Saro_0362 conjugal transfer protein precursor.
 
     0.833
ACE04995.1
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: pvi:Cvib_0389 chromosome segregation DNA-binding protein; Belongs to the ParB family.
 
 
 0.814
ACE03640.1
KEGG: met:M446_6985 hypothetical protein.
       0.775
ACE03641.1
Hypothetical protein.
       0.775
ACE03644.1
PFAM: TRAG family protein; KEGG: mlo:mlr6395 conjugal transfer protein TraG.
 
   
 0.637
ACE03643.1
KEGG: mlo:mlr6191 hypothetical protein.
 
     0.592
ACE03645.1
KEGG: bbt:BBta_7439 hypothetical protein.
 
     0.544
ACE03638.1
TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: chu:CHU_1463 excisionase.
       0.540
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.453
ACE04230.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pvi:Cvib_0908 cobyrinic acid a,c-diamide synthase.
  
     0.450
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.