STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03645.1KEGG: bbt:BBta_7439 hypothetical protein. (142 aa)    
Predicted Functional Partners:
ACE03643.1
KEGG: mlo:mlr6191 hypothetical protein.
 
     0.951
ACE03644.1
PFAM: TRAG family protein; KEGG: mlo:mlr6395 conjugal transfer protein TraG.
 
     0.951
ACE03642.1
KEGG: nar:Saro_0362 conjugal transfer protein precursor.
 
     0.880
ACE03646.1
TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: oan:Oant_3212 P-type conjugative transfer ATPase TrbB.
 
     0.870
ACE03305.1
KEGG: gsu:GSU1361 Piwi domain protein.
  
     0.588
ACE03639.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: swi:Swit_5120 cobyrinic acid a,c-diamide synthase.
 
     0.544
vapC-6
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
   0.499
vapC-5
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
   0.487
ACE03640.1
KEGG: met:M446_6985 hypothetical protein.
       0.473
ACE03641.1
Hypothetical protein.
       0.473
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.