STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03646.1TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: oan:Oant_3212 P-type conjugative transfer ATPase TrbB. (309 aa)    
Predicted Functional Partners:
ACE03644.1
PFAM: TRAG family protein; KEGG: mlo:mlr6395 conjugal transfer protein TraG.
 
   
 0.899
ACE03645.1
KEGG: bbt:BBta_7439 hypothetical protein.
 
     0.870
ACE03643.1
KEGG: mlo:mlr6191 hypothetical protein.
 
     0.867
ACE03642.1
KEGG: nar:Saro_0362 conjugal transfer protein precursor.
 
   
 0.833
ACE04678.1
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
  
  
 0.439
ACE03305.1
KEGG: gsu:GSU1361 Piwi domain protein.
  
     0.406
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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