Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACE03672.1PFAM: filamentation induced by cAMP protein Fic; KEGG: plt:Plut_1784 fic family protein. (498 aa)    
Predicted Functional Partners:
ACE05154.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: dde:Dde_0970 fic family protein.
  
     0.468
ACE05072.1
TIGRFAM: HipA N-terminal domain protein; KEGG: pvi:Cvib_0661 hypothetical protein.
 
     0.442
ACE05071.1
PFAM: HipA domain protein; KEGG: pvi:Cvib_0660 HipA domain protein.
 
     0.427
ACE05073.1
TIGRFAM: transcriptional regulator, y4mF family; PFAM: helix-turn-helix domain protein; KEGG: pvi:Cvib_0662 putative transcriptional regulator, XRE family.
  
     0.425
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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