Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ACE03676.1Transcriptional regulator, CopG family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: ppd:Ppro_1116 transcriptional regulator, CopG family. (89 aa)    
Predicted Functional Partners:
ACE03677.1
TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: ppd:Ppro_1115 addiction module toxin, RelE/StbE family.
 
   0.960
ACE03120.1
PFAM: plasmid stabilization system; KEGG: plt:Plut_0980 putative protein of the plasmid stabilization system.
 
   0.733
ACE03757.1
PFAM: plasmid stabilization system; KEGG: plt:Plut_0980 putative protein of the plasmid stabilization system.
 
   0.655
ACE03675.1
Hypothetical protein.
       0.557
ACE03119.1
KEGG: plt:Plut_0979 hypothetical protein.
  
     0.522
ACE03756.1
KEGG: plt:Plut_0979 hypothetical protein.
  
     0.489
ACE03532.1
KEGG: noc:Noc_2542 transcriptional regulator, XRE family.
  
     0.453
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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