Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACE03687.1PFAM: PemK family protein; KEGG: plt:Plut_1919 transcriptional modulator of MazE/toxin, MazF. (107 aa)    
Predicted Functional Partners:
ACE03686.1
KEGG: plt:Plut_1918 hypothetical protein.
 
   
 0.952
ACE04244.1
Transcriptional regulator/antitoxin, MazE; TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: vei:Veis_2467 SpoVT/AbrB domain protein.
  
 0.898
ACE04073.1
Putative transcriptional regulator, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
  
 
 0.811
ACE03116.1
KEGG: plt:Plut_1918 hypothetical protein.
 
   
 0.797
ACE03996.1
Putative transcriptional regulator, CopG family; PFAM: CopG domain protein DNA-binding domain protein; KEGG: lbi:LEPBI_I2247 putative helix-turn-helix protein CopG.
  
 
 0.637
ACE04823.1
KEGG: cch:Cag_1231 hypothetical protein.
  
  
 0.591
ACE03518.1
KEGG: ppd:Ppro_1113 conserved hypothetical cytosolic protein.
    
 0.587
ACE03308.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: ccr:CC_2771 transcriptional regulator, Cro/CI family.
    
 0.568
ACE04347.1
PFAM: protein of unknown function DUF477; KEGG: lbi:LEPBI_I3031 hypothetical protein.
     
  0.517
ACE04936.1
PFAM: protein of unknown function DUF477; KEGG: cch:Cag_1773 hypothetical protein.
     
  0.517
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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