STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03700.1PFAM: Eco57I restriction endonuclease; KEGG: acr:Acry_2422 site-specific DNA-methyltransferase (adenine-specific). (530 aa)    
Predicted Functional Partners:
ACE03698.1
KEGG: acr:Acry_2421 hypothetical protein.
   
 0.988
ACE03701.1
KEGG: cte:CT1159 type III restriction system methylase.
 
   
 0.955
ACE03699.1
KEGG: pvi:Cvib_1140 hypothetical protein.
       0.625
ACE03704.1
PFAM: N-6 DNA methylase; KEGG: mba:Mbar_A1016 type I restriction-modification system methyltransferase subunit.
     
 0.521
ACE04607.1
PFAM: protein of unknown function DUF179; KEGG: cte:CT0663 putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.520
ACE03702.1
PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: mba:Mbar_A1014 type I restriction-modification system restriction subunit.
     
 0.505
ACE03304.1
KEGG: gsu:GSU1360 hypothetical protein.
   
    0.499
ACE03305.1
KEGG: gsu:GSU1361 Piwi domain protein.
   
    0.499
ACE03490.1
PFAM: Silent information regulator protein Sir2; KEGG: pis:Pisl_0793 NAD-dependent deacetylase.
   
    0.499
ACE03703.1
KEGG: chu:CHU_2939 probable type I restriction-modification system.
     
 0.467
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.