STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03719.1KEGG: cch:Cag_0876 DNA photolyase, class 2; TIGRFAM: deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein. (451 aa)    
Predicted Functional Partners:
ACE03720.1
PFAM: glutamine amidotransferase class-I; KEGG: plt:Plut_0523 glutamine amidotransferase, class I.
       0.752
ACE03718.1
PFAM: sodium/hydrogen exchanger; KEGG: sde:Sde_2015 sodium/hydrogen antiporter.
       0.718
ACE03899.1
KEGG: ppp:PHYPADRAFT_100784 hypothetical protein PROSITE: ASP_RICH GLY_RICH TRP_RICH.
  
     0.658
ACE05287.1
PFAM: SOUL heme-binding protein; KEGG: cte:CT1119 hypothetical protein.
 
     0.515
ACE03510.1
PFAM: TspO/MBR family protein; KEGG: cte:CT1660 CrtK protein.
  
  
 0.498
ACE04388.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.483
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.440
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
   0.433
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.416
ACE04619.1
Amine oxidase; PFAM: Rab GTPase activator; amine oxidase; FAD dependent oxidoreductase; KEGG: cte:CT0649 carotenoid isomerase, putative.
 
  
 0.407
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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