Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE03719.1KEGG: cch:Cag_0876 DNA photolyase, class 2; TIGRFAM: deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein. (451 aa)    
Predicted Functional Partners:
ACE03720.1
PFAM: glutamine amidotransferase class-I; KEGG: plt:Plut_0523 glutamine amidotransferase, class I.
       0.752
ACE03718.1
PFAM: sodium/hydrogen exchanger; KEGG: sde:Sde_2015 sodium/hydrogen antiporter.
       0.718
ACE03899.1
KEGG: ppp:PHYPADRAFT_100784 hypothetical protein PROSITE: ASP_RICH GLY_RICH TRP_RICH.
  
     0.658
ACE05287.1
PFAM: SOUL heme-binding protein; KEGG: cte:CT1119 hypothetical protein.
 
     0.508
ACE03510.1
PFAM: TspO/MBR family protein; KEGG: cte:CT1660 CrtK protein.
  
  
 0.503
ACE04388.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.474
ACE03268.1
KEGG: plt:Plut_1983 aspartate kinase region; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding.
     
 0.427
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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