Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACE03729.1PFAM: alpha/beta hydrolase fold; KEGG: pvi:Cvib_0581 alpha/beta hydrolase fold. (290 aa)    
Predicted Functional Partners:
ACE04563.1
PFAM: alpha/beta hydrolase fold; KEGG: pvi:Cvib_1124 alpha/beta hydrolase fold.
  
     0.754
ACE04490.1
PFAM: alpha/beta hydrolase fold; KEGG: pvi:Cvib_1124 alpha/beta hydrolase fold.
  
     0.739
ACE03245.1
PFAM: alpha/beta hydrolase fold; KEGG: pvi:Cvib_1587 alpha/beta hydrolase fold.
  
     0.723
ACE03312.1
PFAM: alpha/beta hydrolase fold; KEGG: cte:CT0177 proline iminopeptidase, putative.
  
     0.704
ACE05079.1
PFAM: alpha/beta hydrolase fold; KEGG: cch:Cag_1627 3-oxoadipate enol-lactonase, putative.
  
     0.639
ACE04301.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cch:Cag_1016 hypothetical protein.
  
  
  0.558
ACE03730.1
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: pvi:Cvib_0582 transcriptional regulator, BadM/Rrf2 family.
       0.540
ACE03426.1
KEGG: pvi:Cvib_1484 hypothetical protein.
  
    0.538
ACE03241.1
KEGG: plt:Plut_1700 hypothetical protein.
  
    0.532
ACE04036.1
PFAM: alpha/beta hydrolase fold; KEGG: cte:CT1253 hydrolase, alpha/beta hydrolase fold family.
  
     0.523
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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