STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03743.1PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: pvi:Cvib_0500 alpha amylase, catalytic region. (482 aa)    
Predicted Functional Partners:
ACE03744.1
PFAM: transcriptional coactivator/pterin dehydratase; KEGG: psp:PSPPH_3532 pterin-4-alpha-carbinolamine dehydratase.
       0.504
ACE03742.1
PFAM: cyclase/dehydrase; KEGG: plt:Plut_0548 hypothetical protein.
       0.484
ACE03740.1
PFAM: cyclase/dehydrase; KEGG: cte:CT0537 hypothetical protein.
       0.481
ACE03741.1
PFAM: cyclase/dehydrase; KEGG: plt:Plut_0548 hypothetical protein.
       0.481
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.450
ACE05130.1
PFAM: phosphatidate cytidylyltransferase; KEGG: cte:CT1990 hypothetical protein.
  
     0.417
ACE03209.1
KEGG: pvi:Cvib_1672 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
  
 
 0.400
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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