Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE03767.1PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: cte:CT0598 metallo-beta-lactamase family protein. (462 aa)    
Predicted Functional Partners:
ACE03710.1
KEGG: cte:CT1080 hypothetical protein.
    
 0.774
ACE05123.1
PFAM: WD-40 repeat protein; KEGG: cte:CT1986 WD-repeat family protein.
    
 0.774
ACE03089.1
PFAM: RNP-1 like RNA-binding protein; KEGG: cte:CT0132 RNA-binding protein.
   
 0.773
ACE04320.1
PFAM: RNP-1 like RNA-binding protein; KEGG: cch:Cag_1551 RNA-binding region RNP-1 (RNA recognition motif).
   
 0.773
ACE03847.1
KEGG: cch:Cag_0491 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; Belongs to the peptidase S26 family.
   
 
  0.699
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
     
  0.687
ACE03766.1
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rde:RD1_1589 hypothetical protein.
       0.662
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 0.649
ACE04084.1
PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: sat:SYN_01827 SNF2-related:helicase, C-terminal:type III restriction enzyme.
   
 0.580
ACE04590.1
PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: esa:ESA_pESA3p05523 hypothetical protein.
   
 0.580
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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