Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE03790.1ABC transporter-related protein; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT1501 ABC transporter, ATP-binding protein. (585 aa)    
Predicted Functional Partners:
ACE03384.1
ABC transporter-related protein; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT0259 ABC transporter, ATP-binding protein.
  
  
 
0.919
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.711
ACE03791.1
PFAM: regulatory protein MerR; KEGG: cte:CT1500 transcriptional regulator, MerR family.
  
  
 0.582
gyrB
DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
 
 0.571
ACE03170.1
PFAM: ABC-3 protein; KEGG: plt:Plut_0141 ABC 3 transport family protein.
     
 0.563
ACE04068.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_4291 ABC transporter related.
     
  0.535
ACE04943.1
PFAM: permease YjgP/YjgQ family protein; KEGG: pvi:Cvib_0444 permease YjgP/YjgQ family protein.
 
 
 0.527
ACE04547.1
PFAM: permease YjgP/YjgQ family protein; KEGG: cte:CT0740 hypothetical protein.
 
 
 0.526
ACE05075.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT1901 ABC transporter, ATP-binding protein.
    
 0.518
lpxC
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
  
 0.517
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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