STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolD-2ABC transporter-related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (228 aa)    
Predicted Functional Partners:
ACE03941.1
PFAM: protein of unknown function DUF214; KEGG: pvi:Cvib_0716 protein of unknown function DUF214.
 
 0.963
ACE03942.1
PFAM: protein of unknown function DUF214; KEGG: pvi:Cvib_0717 protein of unknown function DUF214.
 
 0.961
ACE03383.1
PFAM: protein of unknown function DUF214; KEGG: cch:Cag_0371 putative ABC transporter, integral membrane protein.
 
 0.932
ACE03568.1
PFAM: protein of unknown function DUF214; KEGG: cch:Cag_1781 lipoprotein releasing system.
 
 0.930
ACE04270.1
PFAM: protein of unknown function DUF214; KEGG: cte:CT1103 conserved hypothetical protein.
 
 0.919
ACE04271.1
PFAM: protein of unknown function DUF214; KEGG: cte:CT1102 probable ABC transporter permease protein.
 
 0.916
lolD
ABC transporter-related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
  
 
0.908
rpsI
PFAM: ribosomal protein S9; KEGG: cch:Cag_1649 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
 
     0.621
ACE03810.1
PFAM: major facilitator superfamily MFS_1; KEGG: pvi:Cvib_1297 major facilitator superfamily MFS_1.
     
 0.556
ACE03815.1
KEGG: ppd:Ppro_2928 efflux transporter, RND family, MFP subunit.
  
 
 0.533
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.