Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE03815.1KEGG: ppd:Ppro_2928 efflux transporter, RND family, MFP subunit. (345 aa)    
Predicted Functional Partners:
ACE03816.1
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sfu:Sfum_2437 heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.981
ACE03814.1
PFAM: outer membrane efflux protein; KEGG: pca:Pcar_1716 outer membrane protein.
 
 0.967
ACE04584.1
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: azo:azo0654 putative outer membrane efflux protein.
  
 0.845
ACE04555.1
PFAM: acriflavin resistance protein; KEGG: plt:Plut_0709 RND family efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.612
ACE04005.1
PFAM: acriflavin resistance protein; KEGG: vok:COSY_0334 cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.596
lolD-2
ABC transporter-related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
 0.589
ACE03249.1
PFAM: acriflavin resistance protein; KEGG: cch:Cag_0123 AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.588
ACE04554.1
PFAM: outer membrane efflux protein; KEGG: pvi:Cvib_1116 outer membrane efflux protein.
 
 0.547
ACE03247.1
PFAM: outer membrane efflux protein; KEGG: cch:Cag_0122 LipD protein, putative.
 
 0.544
ACE04537.1
PFAM: outer membrane efflux protein; KEGG: plt:Plut_0733 outer membrane efflux protein, putative.
 
 0.536
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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