STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03832.1KEGG: rrs:RoseRS_2538 hypothetical protein. (1290 aa)    
Predicted Functional Partners:
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.576
ACE04343.1
PFAM: helicase domain protein; KEGG: sgr:SGR_4668 putative DNA helicase.
 
     0.456
ACE04856.1
PFAM: Excinuclease ABC C subunit domain protein; KEGG: chu:CHU_0210 hypothetical protein.
  
  
 0.420
ACE04895.1
PFAM: Excinuclease ABC C subunit domain protein; KEGG: mmr:Mmar10_2352 excinuclease ABC, C subunit domain protein.
  
  
 0.420
ACE04342.1
KEGG: aoe:Clos_2031 conserved hypothetical protein.
 
     0.411
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.