STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03887.1PFAM: LmbE family protein; KEGG: cch:Cag_1596 hypothetical protein. (270 aa)    
Predicted Functional Partners:
bshC
KEGG: cte:CT1558 hypothetical protein; Belongs to the BshC family.
 
   
 0.807
ACE04739.1
PFAM: glycosyl transferase group 1; KEGG: plt:Plut_0552 glycosyl transferase.
 
  
 0.780
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.580
ACE04236.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pvi:Cvib_0902 methyltransferase type 11.
 
   
 0.572
ACE04959.1
KEGG: cch:Cag_0299 hypothetical protein.
 
     0.467
ACE04059.1
PFAM: PfkB domain protein; KEGG: pvi:Cvib_0779 PfkB domain protein.
  
   
 0.424
ACE04533.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cte:CT0759 hypothetical protein.
 
     0.417
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.