STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03892.1PFAM: glycosyl transferase family 2; KEGG: cte:CT1416 glycosyl transferase. (227 aa)    
Predicted Functional Partners:
ACE03893.1
KEGG: cte:CT1415 hypothetical protein.
     0.994
ACE03056.1
PFAM: Radical SAM domain protein; KEGG: cch:Cag_1591 hypothetical protein.
 
     0.771
ACE03350.1
PFAM: sugar transferase; KEGG: gur:Gura_1698 undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.639
ACE04054.1
PFAM: fatty acid hydroxylase; KEGG: rde:RD1_1450 sterol desaturase, putative.
  
 
   0.593
ACE05008.1
PFAM: Rhodanese domain protein; KEGG: ana:alr2407 hypothetical protein.
  
     0.578
ACE03434.1
PFAM: protein of unknown function DUF1499; KEGG: amr:AM1_3805 hypothetical protein.
  
     0.514
ACE03891.1
Hypothetical protein.
       0.506
ACE03894.1
Carotene 7,8-desaturase; PFAM: amine oxidase; KEGG: cte:CT1414 zeta-carotene desaturase.
     
 0.474
ACE04482.1
KEGG: hch:HCH_04190 hypothetical protein.
  
     0.436
ACE04407.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: sru:SRU_2392 mercuric reductase.
  
     0.406
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.