Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE03894.1Carotene 7,8-desaturase; PFAM: amine oxidase; KEGG: cte:CT1414 zeta-carotene desaturase. (453 aa)    
Predicted Functional Partners:
ACE03241.1
KEGG: plt:Plut_1700 hypothetical protein.
 
  
 0.976
ACE03426.1
KEGG: pvi:Cvib_1484 hypothetical protein.
 
  
 0.976
ACE04619.1
Amine oxidase; PFAM: Rab GTPase activator; amine oxidase; FAD dependent oxidoreductase; KEGG: cte:CT0649 carotenoid isomerase, putative.
 
  
 0.974
ACE04899.1
PFAM: hydroxyneurosporene synthase; KEGG: pvi:Cvib_1502 hydroxyneurosporene synthase.
  
  
  0.920
ACE04115.1
Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cch:Cag_1188 phytoene desaturase.
  
  
 
0.912
ACE04208.1
KEGG: plt:Plut_0955 hypothetical protein.
  
     0.756
ACE03740.1
PFAM: cyclase/dehydrase; KEGG: cte:CT0537 hypothetical protein.
  
     0.740
ACE04301.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cch:Cag_1016 hypothetical protein.
  
     0.728
ACE03742.1
PFAM: cyclase/dehydrase; KEGG: plt:Plut_0548 hypothetical protein.
  
     0.724
ACE03227.1
PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: cte:CT2065 hypothetical protein.
  
     0.702
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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