Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE03913.1PFAM: Squalene/phytoene synthase; KEGG: cte:CT1386 phytoene desaturase. (311 aa)    
Predicted Functional Partners:
ACE04115.1
Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cch:Cag_1188 phytoene desaturase.
  
 0.965
ACE03012.1
TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: cte:CT2256 geranylgeranyl hydrogenase.
 
 
 0.909
ACE03381.1
PFAM: Polyprenyl synthetase; KEGG: pvi:Cvib_1546 geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
 0.905
ACE04381.1
PFAM: Polyprenyl synthetase; KEGG: cte:CT1206 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.905
ACE03314.1
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cte:CT0180 lycopene cyclase, putative.
 
  
 0.872
ACE03180.1
KEGG: mba:Mbar_A3002 hypothetical protein.
    
 0.834
ACE03399.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.825
ACE04619.1
Amine oxidase; PFAM: Rab GTPase activator; amine oxidase; FAD dependent oxidoreductase; KEGG: cte:CT0649 carotenoid isomerase, putative.
 
  
 0.815
nuoH
NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 
  0.760
ACE03808.1
KEGG: pvi:Cvib_1310 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.707
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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