STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03924.1KEGG: plt:Plut_1345 hypothetical protein. (94 aa)    
Predicted Functional Partners:
ACE03925.1
PFAM: NUDIX hydrolase; KEGG: plt:Plut_1344 hypothetical protein.
 
     0.791
ACE03926.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cte:CT1364 peptide ABC transporter, permease protein, putative.
 
     0.775
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
     0.706
ACE03442.1
KEGG: cte:CT0480 hypothetical protein.
  
     0.683
ACE04253.1
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: cch:Cag_0902 putative transcriptional regulator, XRE family.
  
     0.673
ACE03554.1
KEGG: sru:SRU_1396 hypothetical protein.
  
     0.671
ACE03094.1
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
     0.668
ACE04055.1
Anti-sigma-factor antagonist; PFAM: HMG-I and HMG-Y DNA-binding domain protein; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cte:CT0972 anti-anti-sigma factor, putative.
  
     0.661
rimP
Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
  
     0.657
ACE03334.1
KEGG: plt:Plut_1902 hypothetical protein.
  
     0.639
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.