STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03932.1KEGG: plt:Plut_1211 hypothetical protein. (161 aa)    
Predicted Functional Partners:
ACE03933.1
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cch:Cag_0440 two component transcriptional regulator, winged helix family.
       0.752
ACE03934.1
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cch:Cag_0439 periplasmic sensor signal transduction histidine kinase.
       0.752
ACE03931.1
PFAM: conserved hypothetical protein; KEGG: aha:AHA_3790 OB-fold nucleic acid binding domain protein.
       0.581
ACE03935.1
KEGG: cch:Cag_1145 hypothetical protein.
       0.517
ACE03936.1
KEGG: lch:Lcho_1136 hypothetical protein.
       0.517
ACE04512.1
TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: plt:Plut_1448 nickel-dependent hydrogenase b-type cytochrome subunit.
  
     0.494
ACE04511.1
TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: plt:Plut_1449 peptidase M52, hydrogen uptake protein.
  
     0.475
ACE04514.1
KEGG: plt:Plut_1446 Ni-Fe hydrogenase, small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein.
  
     0.421
ACE05384.1
KEGG: abo:ABO_1656 hypothetical protein.
  
     0.410
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.