STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03938.1PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: plt:Plut_1338 OmpA family protein. (229 aa)    
Predicted Functional Partners:
ACE04629.1
PFAM: WD40 domain protein beta Propeller; KEGG: pvi:Cvib_1164 WD40 domain protein beta propeller.
 
 
 0.629
ACE03939.1
KEGG: cte:CT1352 hypothetical protein.
  
    0.451
ACE04062.1
PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: cch:Cag_1379 peptidoglycan-binding LysM.
 
 
 
 0.440
ACE03379.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: pvi:Cvib_1549 outer membrane chaperone Skp (OmpH).
  
 
 0.428
ACE04678.1
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
   
 
 0.406
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.