STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03948.1KEGG: cte:CT1519 hypothetical protein. (196 aa)    
Predicted Functional Partners:
ACE04515.1
KEGG: rba:RB7682 hypothetical protein.
  
     0.517
ACE03947.1
PFAM: CoA-binding domain protein; KEGG: cte:CT1344 hypothetical protein.
       0.495
ACE03088.1
KEGG: vco:VC0395_0417 hypothetical protein.
  
     0.483
ACE03949.1
PFAM: biotin/lipoate A/B protein ligase; KEGG: plt:Plut_1329 lipoate-protein ligase A-like.
       0.461
ACE04149.1
PFAM: surface antigen (D15); KEGG: afw:Anae109_3731 hypothetical protein.
  
     0.424
ACE05217.1
KEGG: pvi:Cvib_0228 hypothetical protein.
  
    0.424
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.