Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACE03374.1 | ACE03961.1 | Cphamn1_0409 | Cphamn1_1020 | KEGG: plt:Plut_1772 hypothetical protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | 0.415 |
| ACE03374.1 | rpoA | Cphamn1_0409 | Cphamn1_2269 | KEGG: plt:Plut_1772 hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.994 |
| ACE03374.1 | rpoB | Cphamn1_0409 | Cphamn1_0319 | KEGG: plt:Plut_1772 hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
| ACE03374.1 | rpoC | Cphamn1_0409 | Cphamn1_0320 | KEGG: plt:Plut_1772 hypothetical protein. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.985 |
| ACE03961.1 | ACE03374.1 | Cphamn1_1020 | Cphamn1_0409 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | KEGG: plt:Plut_1772 hypothetical protein. | 0.415 |
| ACE03961.1 | ACE04621.1 | Cphamn1_1020 | Cphamn1_1703 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | KEGG: pvi:Cvib_1155 putative transmembrane anti-sigma factor. | 0.443 |
| ACE03961.1 | ACE05041.1 | Cphamn1_1020 | Cphamn1_2133 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | KEGG: tde:TDE2679 hypothetical protein. | 0.443 |
| ACE03961.1 | rpoA | Cphamn1_1020 | Cphamn1_2269 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.417 |
| ACE03961.1 | rpoB | Cphamn1_1020 | Cphamn1_0319 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.500 |
| ACE03961.1 | rpoC | Cphamn1_1020 | Cphamn1_0320 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.501 |
| ACE04621.1 | ACE03961.1 | Cphamn1_1703 | Cphamn1_1020 | KEGG: pvi:Cvib_1155 putative transmembrane anti-sigma factor. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | 0.443 |
| ACE05041.1 | ACE03961.1 | Cphamn1_2133 | Cphamn1_1020 | KEGG: tde:TDE2679 hypothetical protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | 0.443 |
| rpoA | ACE03374.1 | Cphamn1_2269 | Cphamn1_0409 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | KEGG: plt:Plut_1772 hypothetical protein. | 0.994 |
| rpoA | ACE03961.1 | Cphamn1_2269 | Cphamn1_1020 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | 0.417 |
| rpoA | rpoB | Cphamn1_2269 | Cphamn1_0319 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| rpoA | rpoC | Cphamn1_2269 | Cphamn1_0320 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| rpoB | ACE03374.1 | Cphamn1_0319 | Cphamn1_0409 | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | KEGG: plt:Plut_1772 hypothetical protein. | 0.992 |
| rpoB | ACE03961.1 | Cphamn1_0319 | Cphamn1_1020 | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: cte:CT1257 hypothetical protein. | 0.500 |
| rpoB | rpoA | Cphamn1_0319 | Cphamn1_2269 | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
| rpoB | rpoC | Cphamn1_0319 | Cphamn1_0320 | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
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