Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ACE03981.1ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT1303 ABC transporter, ATP-binding protein. (629 aa)    
Predicted Functional Partners:
ACE03170.1
PFAM: ABC-3 protein; KEGG: plt:Plut_0141 ABC 3 transport family protein.
 
  
  0.738
ACE05017.1
Ion transport 2 domain protein; PFAM: extracellular solute-binding protein family 3; Ion transport 2 domain protein; SMART: ionotropic glutamate receptor; KEGG: pvi:Cvib_0578 extracellular solute-binding protein, family 3.
     
 0.723
ACE04068.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_4291 ABC transporter related.
    
  0.700
ACE04069.1
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dol:Dole_2020 cobalt ABC transporter, inner membrane subunit CbiQ.
    
  0.694
ACE03418.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccv:CCV52592_0582 sulfate/thiosulfate import ATP-binding protein CysA (sulfate-transporting ATPase).
     
  0.690
rplD
Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.
   
 
 0.668
ACE04071.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: dvu:DVU1058 cobalt transport protein CbiM.
     
  0.667
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
   0.662
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.654
rpsC
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
   0.650
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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