Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE04044.1PFAM: SNARE associated Golgi protein; KEGG: plt:Plut_1193 DedA family protein. (212 aa)    
Predicted Functional Partners:
purC
KEGG: pvi:Cvib_0763 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase.
       0.721
ACE04728.1
PFAM: SNARE associated Golgi protein; KEGG: plt:Plut_0566 DedA family protein.
  
     0.531
ACE04042.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: aoe:Clos_0838 protein of unknown function DUF6 transmembrane.
       0.489
ACE04045.1
PFAM: Transketolase domain protein; KEGG: cte:CT0963 transketolase, N-terminal subunit.
       0.441
ACE04046.1
PFAM: Protein of unknown function methylase putative; KEGG: cch:Cag_1438 hypothetical protein.
       0.423
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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