Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE04054.1PFAM: fatty acid hydroxylase; KEGG: rde:RD1_1450 sterol desaturase, putative. (258 aa)    
Predicted Functional Partners:
ACE03893.1
KEGG: cte:CT1415 hypothetical protein.
 
     0.663
ACE03913.1
PFAM: Squalene/phytoene synthase; KEGG: cte:CT1386 phytoene desaturase.
  
 
 0.603
ACE03892.1
PFAM: glycosyl transferase family 2; KEGG: cte:CT1416 glycosyl transferase.
  
 
   0.583
ACE03056.1
PFAM: Radical SAM domain protein; KEGG: cch:Cag_1591 hypothetical protein.
 
     0.581
ACE04053.1
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pvi:Cvib_0773 cyclopropane fatty acyl phospholipid synthase.
       0.533
ACE04055.1
Anti-sigma-factor antagonist; PFAM: HMG-I and HMG-Y DNA-binding domain protein; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cte:CT0972 anti-anti-sigma factor, putative.
  
    0.524
ACE04960.1
PFAM: diacylglycerol kinase catalytic region; KEGG: cte:CT1567 BmrU protein.
   
 
 0.441
ACE03980.1
PFAM: nuclease (SNase domain protein); KEGG: dvl:Dvul_2575 nuclease (SNase domain protein).
   
    0.418
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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