STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04058.1PFAM: Na+/solute symporter; KEGG: pvi:Cvib_0778 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (587 aa)    
Predicted Functional Partners:
ACE04057.1
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
     
 0.787
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.781
ACE04059.1
PFAM: PfkB domain protein; KEGG: pvi:Cvib_0779 PfkB domain protein.
  
  
 0.746
ACE04060.1
KEGG: cte:CT0977 alpha-amylase family protein.
       0.585
ACE04055.1
Anti-sigma-factor antagonist; PFAM: HMG-I and HMG-Y DNA-binding domain protein; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cte:CT0972 anti-anti-sigma factor, putative.
  
  
 0.548
ACE04979.1
TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: vvy:VV2044 sodium/alanine symporter.
  
  
 0.542
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.505
ACE04966.1
PFAM: Aldehyde Dehydrogenase_; KEGG: plt:Plut_0352 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
 
  
 0.503
ACE03554.1
KEGG: sru:SRU_1396 hypothetical protein.
  
     0.486
ACE05015.1
KEGG: plt:Plut_0305 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein.
   
  
 0.479
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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