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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04075.1PFAM: nitrogen regulatory protein P-II; KEGG: pvi:Cvib_0788 nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (113 aa)    
Predicted Functional Partners:
ACE04076.1
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: plt:Plut_1163 ammonium transporter.
 
 
 0.966
ACE03090.1
TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: plt:Plut_0089 ammonium transporter.
 
 
 0.853
ACE04670.1
PFAM: nitrogen regulatory protein P-II; KEGG: pvi:Cvib_1344 nitrogen regulatory protein P-II.
  
     0.671
ACE04074.1
KEGG: pvi:Cvib_0787 hypothetical protein.
       0.545
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.520
ACE03630.1
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: plt:Plut_0502 glutamate synthase (ferredoxin).
  
  
 0.483
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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