STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04104.1PFAM: band 7 protein; KEGG: cte:CT0796 band 7 family protein. (248 aa)    
Predicted Functional Partners:
ACE04103.1
PFAM: peptidase S14 ClpP; protein of unknown function DUF107; KEGG: cte:CT0795 NfeD protein.
 
  
 0.959
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.752
ftsH-2
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.752
ACE04105.1
PFAM: UspA domain protein; KEGG: pvi:Cvib_1041 UspA domain protein.
       0.619
ACE05430.1
PFAM: Rhomboid family protein; KEGG: pvi:Cvib_1767 rhomboid family protein.
   
 0.567
ACE04941.1
PFAM: peptidase M16 domain protein; KEGG: cte:CT1548 peptidase, M16 family; Belongs to the peptidase M16 family.
  
 0.492
ACE05093.1
PFAM: peptidase M16 domain protein; KEGG: cte:CT1932 peptidase, M16 family; Belongs to the peptidase M16 family.
  
 0.492
ACE04102.1
PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: pvi:Cvib_1043 peptidase, membrane zinc metallopeptidase, putative.
       0.461
ACE04607.1
PFAM: protein of unknown function DUF179; KEGG: cte:CT0663 putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
   
    0.444
yidC
60 kDa inner membrane insertion protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
 
 0.419
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.