Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACE04136.1KEGG: cch:Cag_0892 internalin-related protein. (399 aa)    
Predicted Functional Partners:
ACE03211.1
KEGG: cte:CT2087 esterase/lipase, putative.
  
     0.622
ACE04055.1
Anti-sigma-factor antagonist; PFAM: HMG-I and HMG-Y DNA-binding domain protein; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cte:CT0972 anti-anti-sigma factor, putative.
  
     0.622
ACE05123.1
PFAM: WD-40 repeat protein; KEGG: cte:CT1986 WD-repeat family protein.
  
    0.586
ACE03627.1
KEGG: cte:CT0397 hypothetical protein.
  
     0.577
ACE03300.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pvi:Cvib_1592 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
     0.530
ACE03465.1
PFAM: Methyltransferase type 12; KEGG: pvi:Cvib_1458 methyltransferase type 11.
  
    0.518
ACE04261.1
KEGG: ana:all0050 unknown protein.
  
     0.503
ACE05009.1
KEGG: pvi:Cvib_0377 hypothetical protein.
  
     0.457
ACE04392.1
KEGG: pvi:Cvib_0981 hypothetical protein.
  
     0.437
ACE03334.1
KEGG: plt:Plut_1902 hypothetical protein.
  
     0.433
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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