Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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Textmining
[Homology]
Score
ACE04143.1KEGG: pha:PSHAb0433 hypothetical protein. (298 aa)    
Predicted Functional Partners:
ACE03397.1
KEGG: plt:Plut_1752 hypothetical protein.
  
 0.805
ACE04889.1
KEGG: plt:Plut_0763 hypothetical protein.
     
 0.701
ACE04542.1
KEGG: bav:BAV1041 outer membrane porin protein.
   
 
  0.683
ACE04445.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cte:CT0935 TonB-dependent receptor-related protein.
    
  0.664
ACE04929.1
PFAM: cell divisionFtsK/SpoIIIE; KEGG: pvi:Cvib_0452 cell divisionFtsK/SpoIIIE.
   
 
 0.646
ACE03477.1
KEGG: ter:Tery_2034 RTX toxins and related Ca2+-binding protein.
  
 0.600
ACE04011.1
PFAM: protein of unknown function DUF255; KEGG: cte:CT1279 hypothetical protein.
    
 
 0.583
ACE04584.1
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: azo:azo0654 putative outer membrane efflux protein.
  
 0.535
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.529
ACE04461.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bfs:BF4328 putative TonB-dependent outer membrane receptor protein.
    
 
 0.504
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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