STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04148.1KEGG: syg:sync_2689 hypothetical protein. (302 aa)    
Predicted Functional Partners:
ACE04149.1
PFAM: surface antigen (D15); KEGG: afw:Anae109_3731 hypothetical protein.
 
     0.864
ACE04151.1
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: chu:CHU_3753 hypothetical protein.
 
     0.757
rimP
Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
  
     0.608
ACE05005.1
KEGG: pvi:Cvib_0379 hypothetical protein.
  
     0.598
ACE05272.1
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cte:CT0079 glycerophosphoryl diester phosphodiesterase.
  
     0.541
ACE04717.1
KEGG: cte:CT0352 hypothetical protein.
  
     0.520
ACE04150.1
Putative adenylate/guanylate cyclase; KEGG: gfo:GFO_0037 membrane protein containing adenylate/guanylate cyclase catalytic domain.
 
     0.514
ACE04146.1
Hypothetical protein; KEGG: bfs:BF0908 putative outer membrane protein.
 
     0.489
ACE04147.1
PFAM: metallophosphoesterase; KEGG: plt:Plut_1253 hypothetical protein.
       0.434
ACE03318.1
PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: pvi:Cvib_1582 NAD-dependent epimerase/dehydratase.
  
     0.415
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.