STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04179.1KEGG: sat:SYN_02041 hypothetical cytosolic protein. (251 aa)    
Predicted Functional Partners:
ACE04178.1
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sat:SYN_02042 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
     0.977
ACE04177.1
Hypothetical protein.
       0.762
ACE04002.1
TIGRFAM: DNA binding domain protein, excisionase family; PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sth:STH334 DNA modification methylase M.SthI; Belongs to the N(4)/N(6)-methyltransferase family.
     0.712
ACE03030.1
PFAM: putative RNA methylase; DNA methylase N-4/N-6 domain protein; KEGG: cch:Cag_1099 DNA modification methylase-like; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.614
ACE03098.1
PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mbn:Mboo_2337 DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.577
ACE03617.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: plt:Plut_0330 uridine kinase-like.
  
     0.543
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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