STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04198.1PFAM: Radical SAM domain protein; KEGG: dol:Dole_0890 radical SAM domain protein. (571 aa)    
Predicted Functional Partners:
ACE04314.1
PFAM: Radical SAM domain protein; KEGG: mba:Mbar_A1458 heme biosynthesis protein.
  
     0.577
ACE04196.1
Hypothetical protein.
       0.545
ACE04197.1
KEGG: afw:Anae109_4161 hypothetical protein.
       0.545
ACE03548.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cch:Cag_1730 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.440
ACE04089.1
KEGG: pmo:Pmob_1533 hypothetical protein.
  
     0.431
ACE04195.1
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: plt:Plut_1235 oxidoreductase, FAD-binding.
       0.422
ACE04199.1
PFAM: aminotransferase class I and II; KEGG: plt:Plut_1106 aspartate aminotransferase.
  
    0.414
ACE04200.1
KEGG: cte:CT1004 hypothetical protein.
       0.411
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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