Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACE04208.1KEGG: plt:Plut_0955 hypothetical protein. (234 aa)    
Predicted Functional Partners:
ACE04209.1
KEGG: cch:Cag_0822 hypothetical protein.
 
     0.919
ACE03426.1
KEGG: pvi:Cvib_1484 hypothetical protein.
  
    0.772
ACE03241.1
KEGG: plt:Plut_1700 hypothetical protein.
  
    0.771
ACE03894.1
Carotene 7,8-desaturase; PFAM: amine oxidase; KEGG: cte:CT1414 zeta-carotene desaturase.
  
     0.756
ACE04115.1
Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cch:Cag_1188 phytoene desaturase.
  
     0.754
ACE03011.1
KEGG: cte:CT2257 hypothetical protein.
  
     0.747
ACE04301.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cch:Cag_1016 hypothetical protein.
  
  
  0.747
ACE05130.1
PFAM: phosphatidate cytidylyltransferase; KEGG: cte:CT1990 hypothetical protein.
  
     0.727
ACE03740.1
PFAM: cyclase/dehydrase; KEGG: cte:CT0537 hypothetical protein.
  
     0.711
ACE03227.1
PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: cte:CT2065 hypothetical protein.
  
  
  0.706
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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