STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04218.1KEGG: cte:CT1171 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; Belongs to the peptidase S41A family. (535 aa)    
Predicted Functional Partners:
ACE04219.1
PFAM: cyclase/dehydrase; KEGG: pvi:Cvib_0939 cyclase/dehydrase.
       0.581
ACE04062.1
PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: cch:Cag_1379 peptidoglycan-binding LysM.
 
   
 0.505
ACE03847.1
KEGG: cch:Cag_0491 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; Belongs to the peptidase S26 family.
 
   
 0.497
ACE02994.1
PFAM: peptidase M50; KEGG: acl:ACL_1148 membrane-associated metallopeptidase, M50 family.
 
  
 0.464
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
 
     0.454
ACE04220.1
KEGG: plt:Plut_0963 hypothetical protein.
       0.428
ACE03080.1
TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; KEGG: cte:CT0124 membrane-associated zinc metalloprotease, putative.
 
  
 0.421
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.