STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04245.1KEGG: dol:Dole_2271 hypothetical protein. (103 aa)    
Predicted Functional Partners:
ACE04246.1
TIGRFAM: addiction module component, TIGR02574 family; PFAM: Putative addiction module component CHP02574 family protein; KEGG: cch:Cag_1049 hypothetical protein.
       0.784
ACE04000.1
PFAM: plasmid stabilization system; KEGG: scl:sce1165 hypothetical protein.
  
     0.574
ACE04494.1
PFAM: plasmid stabilization system; KEGG: neu:NE1591 hypothetical protein.
  
     0.470
ACE05446.1
KEGG: mca:MCA1886 hypothetical protein.
  
     0.464
ACE03344.1
PFAM: transposase IS4 family protein; KEGG: pth:PTH_2026 transposase and inactivated derivatives.
  
     0.458
ACE04382.1
PFAM: transposase IS4 family protein; KEGG: pth:PTH_2026 transposase and inactivated derivatives.
  
     0.458
ACE04192.1
KEGG: cch:Cag_0685 hypothetical protein.
  
     0.457
ACE04090.1
KEGG: cch:Cag_1077 hypothetical protein.
  
     0.450
ACE03119.1
KEGG: plt:Plut_0979 hypothetical protein.
 
   0.438
ACE04096.1
TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: fjo:Fjoh_4526 putative transcriptional regulators, CopG/Arc/MetJ family.
  
 
 0.430
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.