STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04272.1PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pvi:Cvib_1621 rubredoxin-type Fe(Cys)4 protein. (54 aa)    
Predicted Functional Partners:
ACE04514.1
KEGG: plt:Plut_1446 Ni-Fe hydrogenase, small subunit; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein.
  
 
 0.698
ACE02995.1
PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: pvi:Cvib_0005 beta-lactamase domain protein.
 
  
 0.675
ACE03548.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cch:Cag_1730 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.637
ACE03799.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: plt:Plut_1493 thiolredoxin peroxidase.
  
  
 0.586
ACE03064.1
KEGG: pvi:Cvib_0746 hypothetical protein.
  
  
 0.537
ACE04565.1
PFAM: Rubrerythrin; KEGG: cte:CT1327 rubrerythrin.
  
  
 0.537
ACE05354.1
PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: gme:Gmet_0668 rubrerythrin.
  
  
 0.537
ACE04273.1
PFAM: GCN5-related N-acetyltransferase; KEGG: cch:Cag_0895 hypothetical protein.
  
    0.521
ACE04608.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: plt:Plut_0636 bacterioferritin comigratory protein, thiol peroxidase, putative.
  
  
 0.488
ACE03576.1
Ferritin Dps family protein; Iron-storage protein.
  
  
 0.474
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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