Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE04284.1KEGG: pvi:Cvib_0103 integrase, catalytic region. (112 aa)    
Predicted Functional Partners:
ACE04283.1
PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: plt:Plut_1820 RNA-directed DNA polymerase.
       0.763
ACE04282.1
Hypothetical protein; KEGG: pvi:Cvib_0103 integrase, catalytic region.
  
     0.733
ACE05056.1
KEGG: pvi:Cvib_0645 putative transposase.
 
   
 0.612
ACE04285.1
KEGG: fph:Fphi_0778 hypothetical protein.
       0.533
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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