Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE04293.1PFAM: IstB domain protein ATP-binding protein; KEGG: gur:Gura_0558 IstB domain protein ATP-binding protein. (245 aa)    
Predicted Functional Partners:
ACE04292.1
PFAM: Integrase catalytic region; KEGG: gur:Gura_0559 integrase, catalytic region.
 
 
 0.953
ACE03331.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 0.814
ACE03040.1
PFAM: Integrase catalytic region; KEGG: plt:Plut_1830 transposase subunit.
 
 
 0.803
ACE03113.1
PFAM: Integrase catalytic region; KEGG: gur:Gura_0559 integrase, catalytic region.
 
 
 0.803
ACE03124.1
PFAM: Integrase catalytic region; KEGG: plt:Plut_1830 transposase subunit.
 
 
 0.803
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
  
 
 0.623
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
     
 0.603
ACE03055.1
KEGG: pvi:Cvib_1453 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases.
     
  0.584
ACE03190.1
TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: fps:FP0387 hypothetical protein.
     
  0.531
ACE03293.1
Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
     
  0.470
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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