STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04300.1KEGG: pvi:Cvib_0856 hypothetical protein. (186 aa)    
Predicted Functional Partners:
ACE03148.1
TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: plt:Plut_0124 chlorophyllide reductase subunit Z.
     
  0.900
ACE03237.1
PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: pvi:Cvib_0370 2-vinyl bacteriochlorophyllide hydratase.
     
  0.900
ACE03561.1
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cte:CT1610 bacteriochlorophyll a synthase.
     
  0.900
ACE03882.1
KEGG: cte:CT1423 chlorophyllide reductase, BchX subunit; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; Sigma-70 region 4 type 2; Belongs to the NifH/BchL/ChlL family.
     
  0.900
ACE03884.1
PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: pvi:Cvib_1239 2-vinyl bacteriochlorophyllide hydratase.
     
  0.900
ACE03964.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cch:Cag_0931 elongator protein 3/MiaB/NifB.
     
  0.900
ACE04027.1
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cch:Cag_1105 bacteriochlorophyll/chlorophyll a synthase.
     
  0.900
ACE04308.1
NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: pvi:Cvib_0527 NmrA family protein.
     
  0.900
ACE04972.1
TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: cch:Cag_0324 chlorophyllide reductase subunit Y.
     
  0.900
bchL
Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
     
  0.900
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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