STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04314.1PFAM: Radical SAM domain protein; KEGG: mba:Mbar_A1458 heme biosynthesis protein. (417 aa)    
Predicted Functional Partners:
ACE04312.1
Hypothetical protein.
       0.773
ACE04313.1
PFAM: Radical SAM domain protein; KEGG: csc:Csac_2182 radical SAM domain protein.
       0.773
ACE04198.1
PFAM: Radical SAM domain protein; KEGG: dol:Dole_0890 radical SAM domain protein.
  
     0.577
ACE04311.1
KEGG: amr:AM1_6172 transposase, IS5 family, putative.
       0.515
ACE03838.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bpl:BURPS1106A_A0033 B12-binding/radical SAM domain protein.
 
    0.476
ACE04760.1
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: plt:Plut_0050 uroporphyrin-III C-methyltransferase-like.
 
  
 0.471
ACE03202.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bte:BTH_II0030 radical SAM domain/B12 binding domain protein.
 
    0.467
ACE03548.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cch:Cag_1730 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.440
ACE04841.1
PFAM: cobalamin B12-binding domain protein; KEGG: ppd:Ppro_3338 glycosyl transferase, family 2.
 
    0.437
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
   
 0.413
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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