STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04333.1PFAM: HhH-GPD family protein; 8-oxoguanine DNA glycosylase domain protein; KEGG: cte:CT0996 8-oxoguanine DNA glycosylase, putative. (313 aa)    
Predicted Functional Partners:
ACE03136.1
Exodeoxyribonuclease III Xth; KEGG: cte:CT2136 AP (apurinic or apyrimidinic) endonuclease, Xth family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase.
  
 0.880
ACE04334.1
PFAM: peptidase M48 Ste24p; KEGG: ppd:Ppro_3278 peptidase M48, Ste24p.
       0.701
ACE02996.1
PFAM: DNA polymerase B exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: cte:CT2284 DNA polymerase family B protein.
  
 
 0.595
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.550
ACE03011.1
KEGG: cte:CT2257 hypothetical protein.
  
     0.461
ACE03865.1
DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein; KEGG: pvi:Cvib_0129 DNA-directed DNA polymerase.
  
 
 0.436
ACE04332.1
KEGG: ote:Oter_0373 radical SAM domain protein.
       0.413
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.