STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04347.1PFAM: protein of unknown function DUF477; KEGG: lbi:LEPBI_I3031 hypothetical protein. (315 aa)    
Predicted Functional Partners:
ACE04348.1
PFAM: protein of unknown function DUF477; KEGG: cch:Cag_1771 hypothetical protein.
 
     0.941
ACE04937.1
PFAM: LemA family protein; KEGG: cch:Cag_1774 LemA family protein.
 
    0.817
ACE04935.1
PFAM: protein of unknown function DUF477; KEGG: pvi:Cvib_0450 protein of unknown function DUF477.
 
     0.777
ACE04349.1
KEGG: aoe:Clos_0418 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein.
       0.574
ACE04897.1
PFAM: Cytochrome b/b6 domain; KEGG: cch:Cag_0395 cytochrome b-c complex, cytochrome b subunit.
    
   0.529
ACE04898.1
Plastoquinol--plastocyanin reductase; PFAM: Rieske [2Fe-2S] domain protein; Cytochrome b6-f complex Fe-S subunit; KEGG: plt:Plut_1719 plastoquinol--plastocyanin reductase.
  
   0.513
ACE04504.1
PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III.
    
   0.465
ACE04506.1
PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: cch:Cag_1357 cytochrome-c oxidase FixO chain.
    
   0.465
ACE04792.1
PFAM: amine oxidase; Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: plt:Plut_0435 gamma-carotene desaturase.
  
   0.439
ACE05265.1
TIGRFAM: arsenite oxidase, small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: ttj:TTHB128 arsenite oxidase, small subunit.
   
   0.439
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.