STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04348.1PFAM: protein of unknown function DUF477; KEGG: cch:Cag_1771 hypothetical protein. (215 aa)    
Predicted Functional Partners:
ACE04347.1
PFAM: protein of unknown function DUF477; KEGG: lbi:LEPBI_I3031 hypothetical protein.
 
     0.941
ACE04936.1
PFAM: protein of unknown function DUF477; KEGG: cch:Cag_1773 hypothetical protein.
 
     0.730
ACE04349.1
KEGG: aoe:Clos_0418 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein.
 
     0.629
ACE04937.1
PFAM: LemA family protein; KEGG: cch:Cag_1774 LemA family protein.
 
     0.611
ACE03064.1
KEGG: pvi:Cvib_0746 hypothetical protein.
  
     0.503
ACE03465.1
PFAM: Methyltransferase type 12; KEGG: pvi:Cvib_1458 methyltransferase type 11.
  
     0.430
ACE03319.1
KEGG: cte:CT0471 hypothetical protein.
  
     0.403
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.