STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04368.1KEGG: cte:CT1194 hypothetical protein. (183 aa)    
Predicted Functional Partners:
ACE04367.1
TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: cte:CT1193 RNA polymerase sigma-54 factor.
       0.795
ACE03501.1
KEGG: plt:Plut_1647 hypothetical protein.
  
     0.774
ACE03728.1
KEGG: cte:CT0523 hypothetical protein.
  
     0.751
ACE03917.1
PFAM: protein of unknown function DUF164; KEGG: cch:Cag_1111 hypothetical protein.
 
     0.751
ACE04695.1
SMART: Tetratricopeptide domain protein; KEGG: cte:CT1812 hypothetical protein.
  
     0.748
ACE04548.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
    0.743
ACE04994.1
KEGG: fjo:Fjoh_0204 hypothetical protein.
  
     0.740
ACE03404.1
PFAM: polysaccharide biosynthesis protein; KEGG: pvi:Cvib_1526 polysaccharide biosynthesis protein.
  
    0.703
ACE03398.1
TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: cte:CT0266 bacterial surface antigen family protein.
  
     0.666
ACE05152.1
KEGG: cte:CT2013 hypothetical protein.
  
     0.664
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.