STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE04379.1PFAM: PASTA domain containing protein; KEGG: cte:CT1205 hypothetical protein. (244 aa)    
Predicted Functional Partners:
ACE03652.1
KEGG: hch:HCH_01953 serine/threonine protein phosphatase.
  
 
 0.688
ACE04380.1
PFAM: transposase IS4 family protein; KEGG: mes:Meso_4308 transposase, IS4.
       0.542
ACE05148.1
KEGG: plt:Plut_0223 hypothetical protein.
  
     0.518
ACE03442.1
KEGG: cte:CT0480 hypothetical protein.
  
   
 0.509
ACE04990.1
Glutathione synthase; PFAM: RimK domain protein ATP-grasp; KEGG: cch:Cag_0947 D-alanine-D-alanine ligase and related ATP-grasp enzyme-like.
     
 0.453
ACE04548.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.449
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
  
 0.422
ACE05413.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
  
 0.414
ACE05152.1
KEGG: cte:CT2013 hypothetical protein.
  
     0.409
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.